Discovery Software Products & Reviews

25

Computational techniques used in both the chemistry and biology aspects of drug discovery, for data acquisition, processing and storage. Software is used for analysis of pathways, target identification, genomics, proteomics, modelling, lead identification, compound analysis and drug modelling among many others.

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Feature Extraction Software

Agilent Technologies

Agilent's Feature Extraction software automatically reads and processes up to 100 raw microarray image files. The software finds and places microarray grids, rejects outlier pixels, accurately determines feature intensities and ratios, flags outlier pixels, and calculates statistical confidences.

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Mass Profiler Professional Software

Agilent Technologies

Agilent Mass Profiler Professional (MPP) software is a powerful chemometrics platform designed to exploit the high information content of MS data and can be used in any MS-based differential analysis to determine relationships among two or more sample groups and variables. 

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METLIN Metabolomics Database and Library

Agilent Technologies

The Agilent MassHunter METLIN Metabolomics Database and Library enable streamlined metabolite identification to facilitate understanding of global metabolic changes that can occur in a biological system. Available as a comprehensive database of metabolites (PCD) that optionally includes MS/MS spectra (PCDL).

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RFLP Decoder Software, Fish Species

Agilent Technologies

The Agilent DNA Fish ID solution uses advanced software to achieve more accurate results – quickly and easily. Key to the process is the Agilent 2100 Bioanalyzer and RFLP Decoder Software performs RFLP pattern matching, which eliminates the need for manual calling

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SilicoCyte

CytoGenomics Inc

SilicoCyte™ is an advanced, modular, flexible and highly integrated microarray analysis platform designed for automated image analysis, comprehensive data annotation, elaborate data analysis and advanced data visualization.It has superior data management and data mining capabilities along with effective project management features that include organizing, assigning and monitoring projects at different levels.SilicoCyte™ suppor…

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GeneSpring Workgroup

Agilent Technologies

Agilent's GeneSpring Workgroup provides a robust data management and analysis environment for GeneSpring data and analysis results. It combines a highly scalable architecture, a rich set of analysis tools, and a series of programmatic interfaces that enable multi-campus enterprises to maximize the value of their research.  Store and protect GeneSpring multi-omics data and analysis results  Publish static images  Secure ac…

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High Resolution Scanner Upgrade License

Agilent Technologies

Agilents High-Resolution C Scanner provides the advanced capabilities your laboratory needs to perform high-density microarray analysis. Optimized through SureScan High Resolution Technology, the dynamic range is now 20X greater than other leading scanners. Seamless data processing and the industry™s first dynamic autofocus helps deliver the clarity and quality your research requires.  Superior resolution, (10 microns down to…

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Analysis Software for Microarray Images: Mapix

Innopsys

Simple, User-friendly, High performance.Mapix is characterised by its ease-of-use. It is a standard in the field of segmentation (automatic searching for microarray spots). Mapix has the most up to date requirements to browse data from microarray experiments quickly, with a high level of reliability and optimised productivity.Mapix can be customized, allowing users to add their own functions using its exclusive plug-in system.…

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Deconvolution Reporting Software (DRS)

Agilent Technologies

Agilent Deconvolution Reporting Software (DRS) for GC/MS is an application for target compound analyses that combines results from the Agilent MSD Productivity ChemStation, the NIST Automated Mass Spectral Deconvolution and Identification Software (AMDIS), and the NIST 2008 Mass Spectral Search Program (NIST08) into one easy-to-read report. 

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PathXL TMA

PathXL

Biomarker Discovery with Tissue Microarrays Using PathXL™ TMA, TMA experiments can be performed anytime, anywhere, reducing administrative costs and time. PathXL™ TMA is perfectly designed to support TMA scoring workflow and already used by pathologists worldwide, the system allows configuration of experiments in minutes. Access and view clinical metadata, the TMA core, scoring criteria and the TMA map all on a single interfac…

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DYMENSION 1

Syngene

Revolutionary 2DGE Software Analysis of single 2D gels - Dymension 1 is ideal for users looking for software to analyse spots between samples containing one 2D gel only. It offers a range of automatic image correction features and methods for resolving and analysing spots on single gels. The software can be easily upgraded to Dymension 2 or 3 if the proteomics needs of the laboratory change.

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DYMENSION 2

Syngene

Rapid Analysis of Multiple 2D Gel Sets DYMENSION 2 has all the features of DYMENSION 1 but has the added ability to detect and compare protein spot maps in multiple gel sets. The software offers many background correction and noise filtering features including a SYPRO® Ruby filter, which can detect and automatically remove spots caused by SYPRO® Ruby crystals adhering to the gel, thus saving users valuable time editing the…

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DYMENSION 3

Syngene

Quick and Easy Analysis of all 2D Gel Applications The exciting DYMENSION 3 software has all the functionality of DYMENSION 2, so can be used to analyse multiple gel sets. In addition, DYMENSION 3 is capable of analysing multi-stained fluorescent gel images stained with up to three contrasting fluorescent labels, for example, Cy™2, Cy™3 and Cy™5. This feature allows users to analyse multiple sets of any type of 2D protein…

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Genom 2005

GSA - Software Development and Analytics

The program "Genom 2005" is a feature rich and user friendly tool to analyse array-experiments.Key Features:Analyse all AffyMetrix-Arrays (cDNA-Arrays or similar technologies could easily be integrated as well) Normalisation of Raw-Data Many additional gene information (official Gennames, Location, Function prediction, Sequences, Database-references (Gene-Ontology, InterPro, SwissPROT ,EMBL, ENSEMBL, LocusLink, OMIM, GeneBank.…

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ProteinCenter™ Data Interpretation Software

Thermo Fisher Scientific

ProteinCenter™ is a web-based data interpretation tool that enables scientists to compare and interpret data sets in minutes instead of months ProteinCenter is a web-based tool that enables scientists to compare and interpret proteomics data sets in minutes and overcomes the hurdle of proteins existing under different names and accession keys in different databases. Regularly updated from all major protein databases, ProteinC…

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Mapix

Innopsys

Simple, User-friendly, High performance. Mapix is a data acquisition and analysis software for microarray images which combines ease-of-use, user-friendliness and high performance. Mapix has the most up to date requirements to browse data from microarray experiments quickly with a high level of reliability and optimised productivity. Mapix is available for 32 and 64 bit operating systems (Windows, Linux and soon MacOS).…

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CLC Protein Workbench Software

CLC bio

Protein Analysis Software - the Next GenerationCLC Protein Workbench creates a software environment enabling users to make a large number of advanced protein sequence analyses, combined with smooth data management, and excellent graphical viewing and output options. Protein Workbench sets new standards for bioinformatics software with its overall graphical display, usability driven and user-friendly interface, while featuring…

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CLC Free Workbench Software

CLC bio

Free Bioinformatics Software Not a demo. Not scaled down. No spyware. No need to register. Yet still a wide variety of features available - and - free! CLC Free Workbench creates a software environment enabling users to make a large number of bioinformatics analyses, combined with smooth data management, and excellent graphical viewing and output options. Some of the many bioinformatics analyses: • Interactive restriction site…

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Mycotoxins PCDL

Agilent Technologies

Perform truly comprehensive mycotoxin screening applications with the Mycotoxins and Related Metabolites Personal Compound Database and Library (PCDL) for TOF and Q-TOF LC/MS systems. Detailed acquisition method setup information allows fast ramp-up to full productivity.

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