Accelerating targeted and discovery proteomics research

Proteomics is revolutionizing our understanding of biology, helping researchers to unravel disease mechanisms and uncover promising new drug targets. It is also providing new tools to identify novel biomarkers for diagnosis, prognosis, and therapeutic monitoring.

As analysis tools such as mass spectrometry (MS) have become more sensitive and efficient, sample preparation in proteomics has emerged as a significant bottleneck, underscoring the need for advanced technologies that enable precise and reproducible protein recovery across diverse sample types.

In this content hub, developed in partnership with Tecan, we present a collection of expert resources that highlight how the latest automated sample preparation platforms, reagents, and software can address these challenges, ensuring consistency and accuracy across experiments while boosting scalability. Read on to discover how these tools are empowering researchers across low- to high-throughput proteomics to accelerate discoveries and unlock deeper proteomic insights to advance the field.

Scalable, automated, and high-throughput proteomics

One of the most significant barriers in proteomics research is the need for sophisticated sample preparation techniques. Manual processing of large sample cohorts requires considerable hands-on time, which can slow down the speed of studies and create the risk of human error. Fortunately, automated technologies capable of performing sample prep for medium to high-throughput proteomics have recently become available.

In the resources highlighted below for example, discover how end-to-end sample prep automation for mass spectrometry-based proteomics can now be achieved using ENRICH-iST technology on Tecan’s Fluent® Automation Workstation with the Resolvex® i300 module. With these tools, users can go from plasma samples to dried peptides in less than 6 hours, enabling 96 samples to be prepared in a single working day.

Plus, learn how the Resolvex® i300 and Resolvex® A200 platforms can provide scalable solutions suitable for several proteomics applications. Download this technical note to see how these platforms can be used with Tecan’s AffinEx Protein A Capture matrix to provide a more cost-effective solution for antibody purification.


Simplified, automated sample preparation for plasma proteomics

Download resource
Next-generation positive pressure sample preparation

Download resource
Antibody purification for process development

Download resource
Revolutionize antibody purification: Introducing AffinEx Protein A Capture

Watch webinar
Automated sample preparation for LC-MS

Download brochure

Low to medium throughput for multiple chromatography instruments

A major challenge in studying the plasma proteome is its wide dynamic range, which means low-abundance proteins – often those of significant pharmaceutical interest – can be masked by high-abundance proteins.

To address this, proteomic sample preparation typically involves steps such as immunoaffinity depletion, SDS-PAGE, or liquid chromatography to enhance detection sensitivity for these proteins prior to MS. However, these methods can introduce variability and a greater risk of contamination, posing challenges to standardization across experiments.

In the resources below, see how Tecan's dual-function NBE columns, and automated systems, such as the Resolvex® A200 and Resolvex® Prep, address these issues by minimizing contamination, reducing sample loss, and improving overall reproducibility.

Plus, learn how Tecan’s Uno Single Cell Dispenser, a compact and automated benchtop device, can support a diverse range of applications — ranging from single-cell proteomics to iPSC libraries, 3D cell research and cell-line development, and beyond.

Resolvex A200: Automated positive pressure processor

Download resource
Protein isolation and digestion with immunoaffinity micro SPE cartridges

Download resource
Rapid proteomics sample preparation with on-column digestion

Download resource
Streamline your sample preparations with Resolvex Prep

Watch webinar

Building a digital ecosystem

As proteomics labs scale up sample throughput through automated workflows, they encounter new challenges in managing data complexity, maintaining workflow efficiency, and ensuring reproducibility across experiments.

Tecan’s LabNavigator and Introspect software work together to address these issues, creating a cohesive digital ecosystem that streamlines workflow execution and enhances data integrity.

LabNavigator is a cloud-based, intuitive digital tool that guides technicians through workflows using a single interface – regardless of reagents, labware, throughput, or format. Its easy-to-follow, end-to-end workflows enable entry-level staff to operate systems effectively, enhancing lab accessibility while improving the consistency and quality of research.

Introspect complements this platform by offering a real-time overview of instrument and fleet performance, allowing lab managers to maximize instrument utilization and streamline lab operations. With user-friendly dashboards and AI-backed recommendations, Introspect enables lab managers to resolve bottlenecks and boost productivity. Learn more about how these tools can transform lab operations in the resources below.

Data-driven insights and real-time updates boost productivity in the lab

Watch video
A cloud-based, intuitive digital product that guides lab operators through end-to-end workflows using a single, straightforward interface

Learn more
Optimize your lab's performance with Introspect

Watch video

Leverage Tecan’s all-in-one sample preparation expertise

By addressing bottlenecks in sensitivity, reproducibility, and standardization, Tecan is helping researchers harness the full potential of proteomics, advancing both academic and industrial goals in drug discovery and disease research.

As an all-in-one provider, the company offers integrated automation solutions for every stage of sample preparation – from sample transport and LIMS registration to solid-phase extraction prior to analysis. These solutions not only bring resource and cost savings but also open new avenues in proteomics research, ultimately accelerating the development of novel drugs and treatments for the many diseases that affect individuals worldwide.

Resolvex® i300

Tecan's advanced automation solutions are tailored to address the complexities of proteomics sample preparation. The Resolvex® i300 module, an integrated component of the Fluent® automation workstation, consolidates sample prep, cleanup, evaporation, and resuspension tasks onto one platform.

Learn moreRequest pricing

Resolvex® Prep

Resolvex Prep

Introducing Resolvex Prep®, automated sample preparation for low- to medium-throughput chromatography and mass spec labs. Resolvex Prep® streamlines the process of preparing samples for multiple instruments and methods, delivering them into sealed vials for analysis, reducing manual inefficiencies and errors.

Learn moreRequest pricing

Fluent® Laboratory Automation Workstation

Tecan has reinvented automation with the Fluent® Laboratory Automation Workstation, a unique instrumentation concept built around the application-specific needs of your laboratory. Fluent® breaks new ground, delivering more capacity and increased speed. It provides superior precision, throughput and walkaway time, making it easier to get more done, more confidently.

Learn moreRequest pricing

Resolvex® A200 Automated ppSPE Workstation

Sample preparation continues to be the most time-consuming part of an analytical workflow. Tecan’s range of smart consumables, coupled with its automation expertise, can help improve the throughput and quality of your sample preparation workflow.

Learn moreRequest pricing

Introspect™

Introspect™ is a laboratory insights tool that offers an intuitive user experience and employs advanced data science. It converts instrument and workflow data into actionable insights, maximizing the utilization, quality, and performance of instrument fleets.

Learn moreRequest pricing

Antibody purification: AffinEx™ Protein A

AffinEx™ Protein A is a dry-state protein purification device offered in Tecan's unique Narrow Bore Extraction™ (NBE™) format. Protein A binds to the Fc-region of monoclonal antibodies while the NBE format provides increased interactions between the target analyte and sorbent bed.

Learn moreRequest pricing