Mass Spectrometry Software Products & Reviews

The Forensic Toxicology Personal Compound Database and Library (PCDL) for TOF or Q-TOF LC/MS systems contains a curated accurate-mass database with over 9,200 compounds and accurate-mass MS/MS spectra for more than 3,900 compounds. Detailed acquisition method setup information provided allows for fast ramp-up to full productivity.

The Agilent Metabolomics dMRM Database and Method offers a comprehensive solution for targeted analysis of central carbon metabolites.

The Extractables and Leachables Personal Compound Database and Library (PCDL) for TOF or Q-TOF LC/MS systems contains a curated accurate-mass database with over 1,000 compounds and accurate-mass MS/MS spectra for 360 compounds. 

Profinder is a fast, batch-processing feature extraction software for differential analysis that supports data from Agilent GC/MSD, GC/Q-TOF, LC/TOF and LC/Q-TOF instruments. Profinder speeds up differential and flux analysis workflows using an intuitive user interface.

VistaFlux software features integrated programs for creating target lists, extracting batch isotopologues, and visualizing stable isotope label flux results on pathways. Turn weeks of manual data processing into just a few hours of work.

Confirm the sequence of proteins and post-translational modifications (PTMs), and characterize variants, before you start expensive testing.

Agilent's Walkup Software enables simplified access to the power and precision of high quality LC and LC/MS processes for multiple users.

The Forensic Toxicology tMRM Database for LC/QQQ system contains a curated database with over 2800 compounds, with up to 10 MRM transitions, fragmentor voltages, and collision energies for all compounds. Instantly build methods for targeted screening and confident quantitation for hundreds of analytes in a single run.

PeakView software is everything you need for spectral analysis and data interrogation. Process accurate mass, structural interpretation, and batch analysis within a few clicks.  With PeakView software, mine your data effectively to unravel critical information. Easily review, identify, superimpose, compare samples, and label peaks across scales and with varying intensities in a single spectrum using advanced algorithms that au…

MasterView software is a powerful application that enables you to accurately screen unknown samples against the targeted list of compounds for quick identification, quantitation, and data review from complex mass spec data files. With MasterView software, laboratories can master the speed, power, and accuracy offered by LC-MS/MS technology. You can easily identify unknown compounds with greater confidence, using integrated lib…

A high-resolution mass spectrometry solution that combines powerful MS/MS sensitivity, fragmentation technology, and a step-change in data-independent acquisition.

MarkerView software does the heavy lifting for you to rigorously mine data and provide statistical analysis and visualization of large numbers of samples. MarkerView software is ideal for profiling and comparing the composition within your samples in order to gain valuable insight into any trends within your mass spectral. This post-acquisition analysis software reduces the need for manual intervention empowering you to explor…

Achieve better insights into biotransformations and impurities

Cloud-based mass spectrometry software

Achieve clarity on your biotherapeutic. Leveraging the latest acquisition techniques and built on a heritage of proven performance, Biologics Explorer software delivers highly accurate and informative workflows for fully characterizing protein biotherapeutics. Reach decisions on the most important critical quality attributes for biopharmaceuticals faster and more confidently.

BiopharmaLynx™ automates the processing and interpretation of biopharmaceutical product LC/MS data, enabling you to characterize your products. Developed with biopharmaceutical thought leaders for confident characterization and optimized workflow, BiopharmaLynx™ leverages Waters' leading protein informatics expertise. Determine the identity, purity and stability of biopharmaceuticals, working with either peptide maps or intac…

SEQUEST Cluster is a complete, preconfigured proteomics solution that enables accelerated throughput of increasingly complex, multidimensional informatics.Product detail:The SEQUEST Cluster offers a scalable solution for computing the large volumes of data typical in most proteomics analyses using LC/MS. Protein database search times are dramatically reduced by harnessing the power of several processing units in one, increasin…

DeNovoX software automates and accelerates sequencing, returning results equal to or better than those formerly achieved through expert manual sequencing of peptides within proteins and is ideally suited for high-throughput analyses of peptide mixtures. Product detail: DeNovoX is a fully-automated de novo sequencing software program that is capable of determining complete or partial amino acid sequences of unknown peptide…

LCquan 2.0 enabling 21 CRF Part 11 compliance. LCQUAN 2.0 is a closed, secure, multi-level user environment for mass spectral quantitative analysis. When LC Quan 2.0 is used in conjunction with Thermo's electronic Record Manager (eRM), this powerful combination provides the user with a completely secure data archival solution. Product detail: LCQUAN 2.0: Quantitation for the regulated laboratories Companies in regulated i…

Mass Spectrometry Software for Spectral Interpretation and Component Characterization

Efficient and user-friendly data analysis for advanced mass spectrometry-based imaging and profiling experiment.

All-in-one software for accurate metabolic analysis through advanced mass spectrometry technology and software.

The Waters IdentityE High Definition Proteomics system defines the new standard for rigorous protein identification. The IdentityE High Definition Proteomics System is an UltraPerformance LC® (UPLC)/High-Bandwidth Mass Spectrometry (MS E) system solution suitable for confident protein identification designed to meet stringent requirements as outlined by leading scientific journals.The new Waters IdentityE High Definition Pro…

Biomass Deconvolution is an Xcalibur layered application that enables users to perform commonly used standard tasks in the application of mass spectrometry to samples and analyses that contain biological molecules such as proteins, peptides, and oligonucleotides . The BioBrowser™ window contains commands and features specific for analyzing biological molecules including Biomass Calculation and Biomass Deconvolution.BIOMASS Cal…

Xaminer, a software product, provides rapid, automated matching of complex GC/MS data files, can automatically perform flammable liquid residue analysis of samples from arson cases at least 20 times faster than had previously been the case, and produces consistent, unbiased quantitative results every time.  Product detail: Xaminer, the new chromatographic matching and instrument control software product, provides rapid, a…